008-serum_lipidomics

Serum lipidomics dataset

High throughput untargeted lipidomics in serum by Ultra-High-Performance Liquid Chromatography Electrospray Ionization High-resolution mass spectrometry (UHPLC-ESI-HRMS).

The serum metabolome is known to represent a variety of environmental, genetic and other endogenous factors (Bar et al. 2020). Lipidomics is a subfield of metabolomics, which is defined as the study of pathways and networks of cellular lipids in biological systems. Lipids perform various functions within the body, from structural components of cell membranes, to energy reserve and regulating hormones. These pivotal functions highlight circulating lipids as playing a key role in a number of age-related diseases such as cardiovascular disease and stroke (Holmes et al. 2018; Michos et al. 2019).

Data availability:

The information is stored in 1 parquet file: serum_lipidomics.parquet

from pheno_utils import PhenoLoader
pl = PhenoLoader('serum_lipidomics')
pl
PhenoLoader for serum_lipidomics with
202 fields
2 tables: ['serum_lipidomics', 'age_sex']

Data dictionary

pl.dict
folder_id feature_set field_string bulk_dictionary data_coding completed field_type bulk_file_extension relative_location description_string sampling_rate stability units strata sexed array list_of_tags debut transformation pandas_dtype
tabular_field_name
collection_date 8 serum_lipidomics Collection date (YYYY-MM-DD) NaN NaN NaN Date NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN NaN NaN NaN NaN Single NaN NaN NaN datetime64[ns]
collection_timestamp 8 serum_lipidomics Collection timestamp NaN NaN NaN Datetime NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN NaN NaN NaN NaN Single NaN NaN NaN datetime64[ns, Asia/Jerusalem]
timezone 8 serum_lipidomics Timezone NaN NaN NaN Categorical (single) NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN NaN NaN NaN NaN Single NaN NaN NaN string
22:6_cholesteryl_ester 8 serum_lipidomics 22:6 Cholesteryl Ester NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
acca_c10:0 8 serum_lipidomics AcCa C10:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
acca_c16:0 8 serum_lipidomics AcCa C16:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
acca_c18:1 8 serum_lipidomics AcCa C18:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:0/c16:0 8 serum_lipidomics Cer d18:0/C16:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c12:0 8 serum_lipidomics Cer d18:1/C12:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c14:0 8 serum_lipidomics Cer d18:1/C14:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c16:0 8 serum_lipidomics Cer d18:1/C16:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c18:0 8 serum_lipidomics Cer d18:1/C18:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c18:1 8 serum_lipidomics Cer d18:1/C18:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c20:0 8 serum_lipidomics Cer d18:1/C20:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c22:0 8 serum_lipidomics Cer d18:1/C22:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c24:0 8 serum_lipidomics Cer d18:1/C24:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c24:1 8 serum_lipidomics Cer d18:1/C24:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c25:0 8 serum_lipidomics Cer d18:1/C25:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
cer_d18:1/c26:0 8 serum_lipidomics Cer d18:1/C26:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
coenzyme_q10 8 serum_lipidomics Coenzyme Q10 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_32:1 8 serum_lipidomics DAG 32:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_34:1 8 serum_lipidomics DAG 34:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_34:2 8 serum_lipidomics DAG 34:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_36:2 8 serum_lipidomics DAG 36:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_36:3 8 serum_lipidomics DAG 36:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_36:4 8 serum_lipidomics DAG 36:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
dag_36:5 8 serum_lipidomics DAG 36:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_12:0_lauric_acid_(dodecanoic_acid) 8 serum_lipidomics FA 12:0 Lauric acid (Dodecanoic acid) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_14:0_myristic_acid_(tetradecanoic_acid) 8 serum_lipidomics FA 14:0 Myristic acid (Tetradecanoic acid) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_17:0_margaric_acid_(heptadecanoic_acid) 8 serum_lipidomics FA 17:0 Margaric acid (Heptadecanoic acid) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_18:0_stearic_acid_(octadecanoic_acid) 8 serum_lipidomics FA 18:0 Stearic acid (Octadecanoic acid) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_18:1 8 serum_lipidomics FA 18:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_18:2 8 serum_lipidomics FA 18:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_18:3_gamma-linolenic_acid_((z)-6,9,12-octadecatrienoic_acid),_w6 8 serum_lipidomics FA 18:3 gamma-Linolenic acid ((Z)-6,9,12-Octad... NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_19:1_(z)-10-nonadecenoic_acid,_w9 8 serum_lipidomics FA 19:1 (Z)-10-Nonadecenoic acid, w9 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_20:0_eicosanoic_acid_(arachidic_acid) 8 serum_lipidomics FA 20:0 Eicosanoic acid (Arachidic acid) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_20:1 8 serum_lipidomics FA 20:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_22:0_behenic_acid 8 serum_lipidomics FA 22:0 Behenic acid NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_22:1_(z)-13-_x0080__x008b_docosenoic_acid_(eruccic_acid),_w9 8 serum_lipidomics FA 22:1 (Z)-13-€‹Docosenoic acid (Eruccic acid... NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_23:0_tricosylic_acid 8 serum_lipidomics FA 23:0 Tricosylic acid NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_24:0_lignoceric_acid 8 serum_lipidomics FA 24:0 Lignoceric acid NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_24:1_(z)-15-tetracosenoic_acid_(nervonic_acid),_w9 8 serum_lipidomics FA 24:1 (Z)-15-Tetracosenoic acid (Nervonic ac... NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_25:0_pentacosanoic_acid 8 serum_lipidomics FA 25:0 Pentacosanoic acid NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
fa_26:0_cerotic_acid 8 serum_lipidomics FA 26:0 Cerotic acid NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
gsl_d18:1/c12:0 8 serum_lipidomics GSL d18:1/C12:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
glccer_d18:1/c16:0 8 serum_lipidomics GlcCer d18:1/C16:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
glccer_d18:1/c22:0 8 serum_lipidomics GlcCer d18:1/C22:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
glccer_d18:1/c24:1 8 serum_lipidomics GlcCer d18:1/C24:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
laccer_d18:1/c12:0 8 serum_lipidomics LacCer d18:1/C12:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
laccer_d18:1/c16:0 8 serum_lipidomics LacCer d18:1/C16:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
laccer_d18:1/c24:1 8 serum_lipidomics LacCer d18:1/C24:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
lysopc_20:4 8 serum_lipidomics LysoPC 20:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
lysopc_20:5 8 serum_lipidomics LysoPC 20:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
lysope_20:4 8 serum_lipidomics LysoPE 20:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_(p-16:0/0:0) 8 serum_lipidomics PC (P-16:0/0:0) NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_32:1 8 serum_lipidomics PC 32:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_32:3 8 serum_lipidomics PC 32:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:0 8 serum_lipidomics PC 34:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:1 8 serum_lipidomics PC 34:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:2 8 serum_lipidomics PC 34:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:3 8 serum_lipidomics PC 34:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:4 8 serum_lipidomics PC 34:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_34:5 8 serum_lipidomics PC 34:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_36:0 8 serum_lipidomics PC 36:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_36:3 8 serum_lipidomics PC 36:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_38:1 8 serum_lipidomics PC 38:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_38:2 8 serum_lipidomics PC 38:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_38:5 8 serum_lipidomics PC 38:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_38:7 8 serum_lipidomics PC 38:7 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:1 8 serum_lipidomics PC 40:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:2 8 serum_lipidomics PC 40:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:3 8 serum_lipidomics PC 40:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:4 8 serum_lipidomics PC 40:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:5 8 serum_lipidomics PC 40:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:6 8 serum_lipidomics PC 40:6 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_40:8 8 serum_lipidomics PC 40:8 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_42:2 8 serum_lipidomics PC 42:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_42:3 8 serum_lipidomics PC 42:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pc_44:12 8 serum_lipidomics PC 44:12 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pce_34:0 8 serum_lipidomics PCE 34:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pce_34:1 8 serum_lipidomics PCE 34:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pce_38:4 8 serum_lipidomics PCE 38:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pce_38:5 8 serum_lipidomics PCE 38:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pe_34:2 8 serum_lipidomics PE 34:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pe_36:1 8 serum_lipidomics PE 36:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pe_36:2 8 serum_lipidomics PE 36:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pe_36:3 8 serum_lipidomics PE 36:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pe_36:4 8 serum_lipidomics PE 36:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pg_34:0 8 serum_lipidomics PG 34:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pi_36:4 8 serum_lipidomics PI 36:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
pi_38:5 8 serum_lipidomics PI 38:5 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_36:0 8 serum_lipidomics PS 36:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_36:1 8 serum_lipidomics PS 36:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_37:2 8 serum_lipidomics PS 37:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_38:2 8 serum_lipidomics PS 38:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_38:3 8 serum_lipidomics PS 38:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_39:1 8 serum_lipidomics PS 39:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_40:3 8 serum_lipidomics PS 40:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_40:4 8 serum_lipidomics PS 40:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_42:4 8 serum_lipidomics PS 42:4 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_44:3 8 serum_lipidomics PS 44:3 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_44:6 8 serum_lipidomics PS 44:6 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
ps_44:7 8 serum_lipidomics PS 44:7 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
sm_d18:1/c12:0 8 serum_lipidomics SM d18:1/C12:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
sm_d18:1/c18:0 8 serum_lipidomics SM d18:1/C18:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
sm_d18:1/c18:1 8 serum_lipidomics SM d18:1/C18:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
sm_d18:1/c20:0 8 serum_lipidomics SM d18:1/C20:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
sm_d18:1/c24:0 8 serum_lipidomics SM d18:1/C24:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_40:0 8 serum_lipidomics TAG 40:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_40:1 8 serum_lipidomics TAG 40:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_41:0 8 serum_lipidomics TAG 41:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_42:0 8 serum_lipidomics TAG 42:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_42:1 8 serum_lipidomics TAG 42:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_43:1 8 serum_lipidomics TAG 43:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
tag_44:0 8 serum_lipidomics TAG 44:0 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
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lysopc_20:1 8 serum_lipidomics lysoPC 20:1 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float
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lysope_18:2 8 serum_lipidomics lysoPE 18:2 NaN NaN NaN Continuous NaN serum_lipidomics/serum_lipidomics.parquet NaN NaN Accruing Intensity (log10) Primary Both sexes Single NaN 2019-02-19 log1p float

Plot histogram and ecdf for 22:6_cholesteryl_ester at baseline visit

from pheno_utils.basic_plots import hist_ecdf_plots

col = "22:6_cholesteryl_ester"
df = pl[[col] + ["age", "sex", "collection_date"]].loc[:,:,"00_00_visit",0,:]

# plot histogram and ecdf
hist_ecdf_plots(df.dropna(subset=[col,"sex", "age"]), col, gender_col="sex")

# stats
display(df[col].describe().to_frame().T)

count mean std min 25% 50% 75% max
22:6_cholesteryl_ester 5711.0 0.949672 0.340004 0.0 0.732755 0.961281 1.164637 2.607505