pheno-utils

A pip-installable python library for Dataloader and analysis tools.

See full documentation

Install

pip install pheno_utils

Features: Data Loaders

  • PhenoLoader
    • Full access to data fields in a specific dataset
    • Access to tabular features
    • Access to raw data (images, time series, genetic variants)
    • Access to field metadata
  • MetaLoader
    • Get an overview of all datasets and search throughout datasets
    • Load tabular features from multiple datasets
    • Load paths to raw data from multiple datasets

How to use

Examples:

from pheno_utils import PhenoLoader

dl = PhenoLoader("fundus")
from pheno_utils import MetaLoader

ml = MetaLoader()